Research Articles
The WikiPathways App for Cytoscape: How Open Peer Review Built a Bridge for Biological Discovery
Explore how the WikiPathways App for Cytoscape transforms biological pathway analysis through open peer review and collaborative science.
Cracking Biology's Code: How the Weighted True Path Rule Predicts Gene Function
Discover how the Weighted True Path Rule algorithm revolutionizes gene function prediction by navigating biological hierarchies with precision.
Unfolding Life's Mysteries: How Graph-Based Methods Are Revolutionizing Protein Science
Explore how graph-based computational methods are transforming protein classification and orthology inference in the era of big data biology.
The Secret Language of Genes: From What They Are to How They Work Together
Discover how gene ontologies transformed functional genomics and revealed the intricate dependencies between biological processes through computational analysis.
The Symphony of Life: Listening to Thousands of Genes at Once with DNA Microarrays
Discover how DNA microarrays revolutionized biology by allowing scientists to analyze the expression of thousands of genes simultaneously, unlocking the secrets of cellular function and disease.
The Molecular Matchmaker: Finding Drugs Without a Blueprint
Discover how alignment-free, ultra-high-throughput comparison of protein binding sites is revolutionizing drug discovery by focusing on 3D shape over genetic sequence.
Decoding a Seafood Pathogen: How AI Is Exposing Vibrio's Hidden Evolution
Discover how bioinformatics and machine learning are revealing the genomic evolution of Vibrio parahaemolyticus across environmental, seafood, and clinical isolates.
The Protein Social Network: Finding VIPs Without Guesswork
Discover how the Refined 3-in-1 Fused Protein Similarity Measure revolutionizes hub protein detection in PPI networks without arbitrary thresholds.