What Your DNA Says About Your Breathing
The key to slowing lung function decline may lie hidden in our genes, and scientists are finally learning how to read the instructions.
Have you ever wondered why some lifelong smokers never develop breathing problems while others with healthy habits struggle with lung disease? The answer may lie deep within our genetic code. Our lungs, like the rest of our body, change as we age. Typically, lung function increases through childhood, plateaus in early adulthood, then gradually declines with age. However, for some people, this decline happens much faster, leading to chronic respiratory diseases like COPD—a leading cause of death worldwide.
Participants in the study
Genetic variants identified
Average follow-up period
While environmental factors like smoking certainly contribute to accelerated lung function decline, they don't tell the whole story. Not all smokers develop lung disease, and non-smokers can still develop chronic lung conditions. The missing piece of this puzzle appears to be genetic susceptibility.
Recent groundbreaking research has uncovered novel genetic signals associated with how quickly our lung function declines, bringing us closer to understanding the complex interplay between our DNA and respiratory health.
In the largest genome-wide association study (GWAS) of lung function decline to date, researchers analyzed genetic data from 52,056 participants across diverse ancestral backgrounds, including White, Black, Hispanic, and Chinese American individuals 1 5 .
52,056 individuals from diverse ancestral backgrounds
Mean of 2.3 spirometry measurements over 8.6 years
This research wasn't a brief snapshot in time. Participants had a mean of 2.3 spirometry measurements over approximately 8.6 years of follow-up, providing valuable longitudinal data on how their lung function changed 1 5 .
The study focused on three key measurements of lung health:
Forced expiratory volume in one second - how much air you can forcefully exhale in one second
Forced vital capacity - the total amount of air you can exhale after taking the deepest breath possible
The proportion of your vital capacity you can exhale in one second
Unlike earlier studies with limited findings, this massive multi-ancestry effort identified 361 distinct genetic variants reaching genome-wide significance for association with lung function decline 1 .
Including participants from diverse ancestral backgrounds is crucial in genetic research. Genetic variations can differ significantly across populations, and findings from one group may not apply to others. By including multiple ancestries, researchers can identify genetic signals that are relevant across human populations and discover unique variants that might be missed in single-ancestry studies.
This inclusive approach not only makes the findings more broadly applicable but also helps address historical disparities in genetic research, which has traditionally focused on European populations.
Through sophisticated statistical analysis and functional mapping, the research team identified dozens of genetic locations associated with accelerated lung function decline. These genetic signals overlapped with previously known genetic associations for various pulmonary traits, suggesting shared biological pathways between lung function and respiratory diseases 1 .
Perhaps most importantly, the study provided evidence for a role of endogenous corticosteroids in the etiology of lung function decline. Our bodies naturally produce these steroid hormones, which have anti-inflammatory properties, and it appears that genetic differences in how we process these compounds may influence how quickly our lung function declines 1 5 .
When the researchers tested their most significant findings in independent COPD-enriched cohorts, 20.5% of the available variants showed nominal association with lung function decline, providing important replication of their discoveries 1 .
The research team didn't stop at simply identifying genetic variants. They dug deeper to understand which specific genes were being influenced and how this information could lead to practical treatments.
Through gene-level analysis, they implicated 38 genes with consistent associations across ancestries or decline phenotypes. Eight of these genes showed particularly strong evidence, including XIRP2, GRIN2D, SATB1, MARCHF4, SIPA1L2, ANO5, H2BC10, and FAF2 1 .
In an exciting development for future therapeutics, drug repurposing analysis identified 43 approved compounds that target eight of the 38 implicated genes 1 5 . This suggests that medications already approved for other conditions might potentially be repurposed to slow lung function decline and treat lung disease, potentially shortening the path from discovery to clinical application.
| Gene Symbol | Consistency Across Ancestries | Potential Biological Role |
|---|---|---|
| XIRP2 | Consistent | Not specified in study |
| GRIN2D | Consistent | Not specified in study |
| SATB1 | Consistent | Not specified in study |
| MARCHF4 | Consistent | Not specified in study |
| SIPA1L2 | Consistent | Not specified in study |
| ANO5 | Consistent | Not specified in study |
| H2BC10 | Consistent | Not specified in study |
| FAF2 | Consistent | Not specified in study |
While GWAS identifies genetic variants associated with traits, it doesn't automatically reveal which variants are causally responsible. A complementary study published in Nature Communications tackled this challenge head-on using an innovative approach called Massively Parallel Reporter Assays (MPRAs) 4 .
The research team focused on 1,249 candidate genetic variants associated with non-small cell lung cancer susceptibility from previous GWAS. For each variant, they designed 120-base pair DNA sequences centered on the genetic variant, creating pairs for both alleles (versions) of each variant 4 .
1,249 candidate genetic variants from previous GWAS studies
120-base pair DNA sequences centered on each genetic variant
DNA sequences cloned into reporter vectors with unique barcodes
Library transfected into three different lung or lung cancer cell lines
Sequencing barcodes to measure transcriptional activity
These DNA sequences were cloned into reporter vectors containing unique DNA barcodes, creating a massive library of genetic constructs. This library was then transfected into three different lung or lung cancer cell lines in six independent technical replicates 4 .
By sequencing the barcodes in the resulting RNA, the researchers could precisely measure the transcriptional activity driven by each genetic variant. This allowed them to identify which variants actively influenced gene expression rather than just being correlated with it 4 .
The MPRA approach identified 82 functional regulatory variants distributed across 15 genetic loci. The effect sizes of these functional variants were generally modest, which is typical for complex traits, but their identification represents a crucial step from mere association to understanding mechanism 4 .
Functional regulatory variants identified
Genetic loci with functional variants
Potential causal variants identified
By integrating these MPRA results with additional functional genomic data, the researchers identified 30 potential causal variants within 12 loci. They discovered three distinct genetic architectures underlying lung cancer susceptibility:
This nuanced understanding moves beyond the simplified model of one variant/one effect that has historically dominated thinking about genetic contributions to disease.
| Architecture Type | Description | Example Loci |
|---|---|---|
| Multiple causal variants in single haplotype block | Several causal variants located close together on the same chromosomal segment | 4q22.1, 3q28, 14q13.1 |
| Multiple causal variants in multiple haplotype blocks | Causal variants distributed across different chromosomal segments | 5p15.33, 11q23.3 |
| Single causal variant | One primary variant responsible for the observed effect | 20q11.23, 6p21.2 |
Modern genetic research relies on sophisticated tools and methods to unravel complex biological questions. Here are some of the key approaches used in studying the genetics of lung function decline:
| Tool/Method | Function | Application in Lung Research |
|---|---|---|
| Genome-Wide Association Studies (GWAS) | Identifies genetic variants associated with traits or diseases across the entire genome | Discovering variants linked to lung function decline 1 5 |
| Massively Parallel Reporter Assays (MPRAs) | High-throughput experimental evaluation of the transcriptional regulatory potential of noncoding DNA sequences | Determining causal variants from GWAS hits 4 |
| Functional Mapping and Annotation (FUMA) | Platform for functional annotation of GWAS results | Identifying distinct significant variants and their potential functional impacts 5 |
| Expression Quantitative Trait Loci (eQTL) analysis | Identifies genetic variants that influence gene expression levels | Connecting regulatory variants to their target genes 4 |
| Polygenic Risk Scores (PRS) | Summarizes the cumulative effect of many genetic variants on disease risk | Potentially improving risk prediction for respiratory conditions 4 |
The genetic influences on lung function appear to extend beyond respiratory health. A 2025 study published in Brain, Behavior, and Immunity revealed surprising genetic overlaps between severe psychiatric disorders and lung function 7 .
400-800 shared genetic variants between psychiatric conditions and lung function
268 novel loci for psychiatric disorders and 244 for respiratory phenotypes
The researchers found moderate polygenic overlap (approximately 400 to 800 shared genetic variants) between psychiatric conditions like schizophrenia and bipolar disorder with both lung function and asthma. They identified hundreds of shared genomic loci, including 268 novel loci for psychiatric disorders and 244 novel loci for respiratory phenotypes 7 .
These fascinating connections suggest the existence of a "lung-brain axis" with overlapping biological mechanisms that might explain why respiratory and psychiatric conditions often co-occur. Understanding these shared pathways could inspire novel treatment approaches that benefit both respiratory and mental health 7 .
The discovery of hundreds of genetic variants associated with lung function decline represents a significant leap forward in understanding respiratory health. The multi-ancestry approach of these recent studies not only makes the findings more broadly applicable but also demonstrates the importance of diversity in genetic research.
As researchers continue to unravel the complex relationships between our genes, environment, and lung health, we move closer to a future where personalized interventions could slow lung function decline before it leads to debilitating disease. The identification of already-approved drugs that target implicated genes offers particular promise for accelerating the translation of these genetic discoveries into clinical practice.
Personalized interventions based on genetic profiles could revolutionize respiratory care
While there's still much to learn, these genetic insights are helping us breathe new life into the quest for better respiratory health for all.